The FACS facility is a collaboration between the Finsen Institute, BRIC and the Bartholin Institute. Users can be granted access to the facility when they have received appropriate training and agreed to follow the guidelines to the facility. User requests can be directed to Anna Fossum. Access to the facility can be obtained from Knud Josefsen.

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The center has a number of BD FACS analyzers and sorters. For analysis, a Canto II, two Calibur and a LSR II are available. For sorting, two BD ARIA are in operation. Further, a Compucyte laser scan cytometer is available for scanning cells attached to a slide (culture cells or histological sections).

A laser intercepts with the laminar sheet fluid of a cell sorter.